The Resource Algorithms in Bioinformatics : Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings, edited by Roderic Guigó, Dan Gusfield, (electronic resource)

Algorithms in Bioinformatics : Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings, edited by Roderic Guigó, Dan Gusfield, (electronic resource)

Label
Algorithms in Bioinformatics : Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings
Title
Algorithms in Bioinformatics
Title remainder
Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings
Statement of responsibility
edited by Roderic Guigó, Dan Gusfield
Creator
Contributor
Editor
Provider
Subject
Language
eng
Summary
This book constitutes the refereed proceedings of the Second International Bioinformatics, WABI 2002, held in Rome, Italy, in September 2002. The 39 revised full papers presented together with an full invited paper were carefully reviewed and selected from 83 submissions. Among the topics addressed are exact and approximate algorithms for genomics, genetics, sequence analysis, gene and signal recognition, alignment, molecular evolution, phylogenetics, structure determination and prediction, gene expression and gene networks, proteomics, functional genomics, and drug design
Member of
http://library.link/vocab/creatorName
Guigó, Roderic
Image bit depth
0
LC call number
QA76.9.A43
Literary form
non fiction
http://library.link/vocab/relatedWorkOrContributorName
  • Gusfield, Dan
  • SpringerLink
Series statement
Lecture Notes in Computer Science,
Series volume
2452
http://library.link/vocab/subjectName
  • Computer science
  • Data structures (Computer science)
  • Computer software
  • Electronic data processing
  • Bioinformatics
  • Biology
  • Computer Science
  • Algorithm Analysis and Problem Complexity
  • Computation by Abstract Devices
  • Data Structures
  • Numeric Computing
  • Computer Appl. in Life Sciences
  • Bioinformatics
Label
Algorithms in Bioinformatics : Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings, edited by Roderic Guigó, Dan Gusfield, (electronic resource)
Instantiates
Publication
Antecedent source
mixed
Carrier category
online resource
Carrier category code
cr
Carrier MARC source
rdacarrier
Color
not applicable
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
Simultaneous Relevant Feature Identification and Classification in High-Dimensional Spaces -- Pooled Genomic Indexing (PGI): Mathematical Analysis and Experiment Design -- Practical Algorithms and Fixed-Parameter Tractability for the Single Individual SNP Haplotyping Problem -- Methods for Inferring Block-Wise Ancestral History from Haploid Sequences -- Finding Signal Peptides in Human Protein Sequences Using Recurrent Neural Networks -- Generating Peptide Candidates from Amino-Acid Sequence Databases for Protein Identification via Mass Spectrometry -- Improved Approximation Algorithms for NMR Spectral Peak Assignment -- Efficient Methods for Inferring Tandem Duplication History -- Genome Rearrangement Phylogeny Using Weighbor -- Segment Match Refinement and Applications -- Extracting Common Motifs under the Levenshtein Measure: Theory and Experimentation -- Fast Algorithms for Finding Maximum-Density Segments of a Sequence with Applications to Bioinformatics -- FAUST: An Algorithm for Extracting Functionally Relevant Templates from Protein Structures -- Efficient Unbound Docking of Rigid Molecules -- A Method of Consolidating and Combining EST and mRNA Alignments to a Genome to Enumerate Supported Splice Variants -- A Method to Improve the Performance of Translation Start Site Detection and Its Application for Gene Finding -- Comparative Methods for Gene Structure Prediction in Homologous Sequences -- MultiProt — A Multiple Protein Structural Alignment Algorithm -- A Hybrid Scoring Function for Protein Multiple Alignment -- Functional Consequences in Metabolic Pathways from Phylogenetic Profiles -- Finding Founder Sequences from a Set of Recombinants -- Estimating the Deviation from a Molecular Clock -- Exploring the Set of All Minimal Sequences of Reversals — An Application to Test the Replication-Directed Reversal Hypothesis -- Approximating the Expected Number of Inversions Given the Number of Breakpoints -- Invited Lecture — Accelerating Smith-Waterman Searches -- Sequence-Length Requirements for Phylogenetic Methods -- Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle -- NeighborNet: An Agglomerative Method for the Construction of Planar Phylogenetic Networks -- On the Control of Hybridization Noise in DNA Sequencing-by-Hybridization -- Restricting SBH Ambiguity via Restriction Enzymes -- Invited Lecture — Molecule as Computation: Towards an Abstraction of Biomolecular Systems -- Fast Optimal Genome Tiling with Applications to Microarray Design and Homology Search -- Rapid Large-Scale Oligonucleotide Selection for Microarrays -- Border Length Minimization in DNA Array Design* -- The Enhanced Suffix Array and Its Applications to Genome Analysis -- The Algorithmic of Gene Teams -- Combinatorial Use of Short Probes for Differential Gene Expression Profiling -- Designing Specific Oligonucleotide Probes for the Entire S. cerevisiae Transcriptome -- K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data -- Inversion Medians Outperform Breakpoint Medians in Phylogeny Reconstruction from Gene-Order Data -- Modified Mincut Supertrees
Dimensions
unknown
Extent
X, 554 p.
File format
multiple file formats
Form of item
electronic
Isbn
9783540457848
Level of compression
uncompressed
Media category
computer
Media MARC source
rdamedia
Media type code
c
Other control number
10.1007/3-540-45784-4
Other physical details
online resource.
Quality assurance targets
absent
Reformatting quality
access
Specific material designation
remote
System control number
(DE-He213)978-3-540-45784-8
Label
Algorithms in Bioinformatics : Second International Workshop, WABI 2002 Rome, Italy, September 17–21, 2002 Proceedings, edited by Roderic Guigó, Dan Gusfield, (electronic resource)
Publication
Antecedent source
mixed
Carrier category
online resource
Carrier category code
cr
Carrier MARC source
rdacarrier
Color
not applicable
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
Simultaneous Relevant Feature Identification and Classification in High-Dimensional Spaces -- Pooled Genomic Indexing (PGI): Mathematical Analysis and Experiment Design -- Practical Algorithms and Fixed-Parameter Tractability for the Single Individual SNP Haplotyping Problem -- Methods for Inferring Block-Wise Ancestral History from Haploid Sequences -- Finding Signal Peptides in Human Protein Sequences Using Recurrent Neural Networks -- Generating Peptide Candidates from Amino-Acid Sequence Databases for Protein Identification via Mass Spectrometry -- Improved Approximation Algorithms for NMR Spectral Peak Assignment -- Efficient Methods for Inferring Tandem Duplication History -- Genome Rearrangement Phylogeny Using Weighbor -- Segment Match Refinement and Applications -- Extracting Common Motifs under the Levenshtein Measure: Theory and Experimentation -- Fast Algorithms for Finding Maximum-Density Segments of a Sequence with Applications to Bioinformatics -- FAUST: An Algorithm for Extracting Functionally Relevant Templates from Protein Structures -- Efficient Unbound Docking of Rigid Molecules -- A Method of Consolidating and Combining EST and mRNA Alignments to a Genome to Enumerate Supported Splice Variants -- A Method to Improve the Performance of Translation Start Site Detection and Its Application for Gene Finding -- Comparative Methods for Gene Structure Prediction in Homologous Sequences -- MultiProt — A Multiple Protein Structural Alignment Algorithm -- A Hybrid Scoring Function for Protein Multiple Alignment -- Functional Consequences in Metabolic Pathways from Phylogenetic Profiles -- Finding Founder Sequences from a Set of Recombinants -- Estimating the Deviation from a Molecular Clock -- Exploring the Set of All Minimal Sequences of Reversals — An Application to Test the Replication-Directed Reversal Hypothesis -- Approximating the Expected Number of Inversions Given the Number of Breakpoints -- Invited Lecture — Accelerating Smith-Waterman Searches -- Sequence-Length Requirements for Phylogenetic Methods -- Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle -- NeighborNet: An Agglomerative Method for the Construction of Planar Phylogenetic Networks -- On the Control of Hybridization Noise in DNA Sequencing-by-Hybridization -- Restricting SBH Ambiguity via Restriction Enzymes -- Invited Lecture — Molecule as Computation: Towards an Abstraction of Biomolecular Systems -- Fast Optimal Genome Tiling with Applications to Microarray Design and Homology Search -- Rapid Large-Scale Oligonucleotide Selection for Microarrays -- Border Length Minimization in DNA Array Design* -- The Enhanced Suffix Array and Its Applications to Genome Analysis -- The Algorithmic of Gene Teams -- Combinatorial Use of Short Probes for Differential Gene Expression Profiling -- Designing Specific Oligonucleotide Probes for the Entire S. cerevisiae Transcriptome -- K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data -- Inversion Medians Outperform Breakpoint Medians in Phylogeny Reconstruction from Gene-Order Data -- Modified Mincut Supertrees
Dimensions
unknown
Extent
X, 554 p.
File format
multiple file formats
Form of item
electronic
Isbn
9783540457848
Level of compression
uncompressed
Media category
computer
Media MARC source
rdamedia
Media type code
c
Other control number
10.1007/3-540-45784-4
Other physical details
online resource.
Quality assurance targets
absent
Reformatting quality
access
Specific material designation
remote
System control number
(DE-He213)978-3-540-45784-8

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