The Resource Algorithms on strings, trees, and sequences : computer science and computational biology, Dan Gusfield

Algorithms on strings, trees, and sequences : computer science and computational biology, Dan Gusfield

Label
Algorithms on strings, trees, and sequences : computer science and computational biology
Title
Algorithms on strings, trees, and sequences
Title remainder
computer science and computational biology
Statement of responsibility
Dan Gusfield
Creator
Subject
Language
eng
Summary
Publisher Description (unedited publisher data) String algorithms are a traditional area of study in computer science. In recent years their importance has grown dramatically with the huge increase of electronically stored text and of molecular sequence data (DNA or protein sequences) produced by various genome projects. This book is a general text on computer algorithms for string processing. In addition to pure computer science, the book contains extensive discussions on biological problems that are cast as string problems, and on methods developed to solve them. It emphasises the fundamental ideas and techniques central to today's applications. New approaches to this complex material simplify methods that up to now have been for the specialist alone. With over 400 exercises to reinforce the material and develop additional topics, the book is suitable as a text for graduate or advanced undergraduate students in computer science, computational biology, or bio-informatics. Its discussion of current algorithms and techniques also makes it a reference for professionals. Library of Congress subject headings for this publication: Computer algorithms, Bioinformatics, Molecular biology Data processing
Cataloging source
DLC
http://library.link/vocab/creatorName
Gusfield, Dan
Illustrations
illustrations
Index
index present
LC call number
QA76.9.A43
LC item number
G87 1997
Literary form
non fiction
Nature of contents
bibliography
NLM call number
  • 1997 I-920
  • QA 76.9.A43
NLM item number
G982a 1997
http://library.link/vocab/subjectName
  • Computer algorithms
  • Computational biology
  • Molecular biology
  • Algorithms
  • Sequence Analysis
  • Molecular Biology
  • Electronic Data Processing
  • arbre
  • séquence moléculaire
  • chaîne caractère
  • biologie moléculaire
  • algorithme
  • Algorithmes
  • Biologie moléculaire
  • Computational biology
  • Computer algorithms
  • Molecular biology
  • Bio-informatica
  • Moleculaire biologie
  • Algoritmen
  • Matching
  • Algorithmus
  • Biologie
  • Molekularbiologie
  • Zeichenkette
  • Algorithmes
  • Biologie moléculaire
  • Algorithmus
  • Biologie
  • Molekularbiologie
  • Zeichenkette
Label
Algorithms on strings, trees, and sequences : computer science and computational biology, Dan Gusfield
Instantiates
Publication
Bibliography note
Includes bibliographical references (p. 505-523) and index
Carrier category
volume
Carrier category code
nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
Exact matching: fundamental preprocessing and first algorithms -- Exact matching: classical comparison-based methods -- Exact matching: a deeper look at classical methods -- Seminumerical string matching -- Introduction to suffix trees -- Linear-time construction of suffix trees -- First applications of suffix trees -- Constant-time lowest common ancestor retrieval -- More applications of suffix trees -- The importance of (sub)sequence comparison in molecular biology --Core string edits, alignments, and dynamic programming -- Refining core string edits and alignments -- Extending the core problems -- Multiple string comparison -- The Holy Grail -- sequence databases and their uses- The Mother Lode -- Maps, mapping, sequencing, and superstrings -- Strings and evolutionary trees -- Three short topics -- Models of Genome-level mutations
Dimensions
26 cm
Extent
xviii, 534 pages
Isbn
9780521585194
Lccn
96046612
Media category
unmediated
Media MARC source
rdamedia
Media type code
n
Other physical details
illustrations
System control number
  • (OCoLC)35688227
  • (OCoLC)ocm35688227
Label
Algorithms on strings, trees, and sequences : computer science and computational biology, Dan Gusfield
Publication
Bibliography note
Includes bibliographical references (p. 505-523) and index
Carrier category
volume
Carrier category code
nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
Exact matching: fundamental preprocessing and first algorithms -- Exact matching: classical comparison-based methods -- Exact matching: a deeper look at classical methods -- Seminumerical string matching -- Introduction to suffix trees -- Linear-time construction of suffix trees -- First applications of suffix trees -- Constant-time lowest common ancestor retrieval -- More applications of suffix trees -- The importance of (sub)sequence comparison in molecular biology --Core string edits, alignments, and dynamic programming -- Refining core string edits and alignments -- Extending the core problems -- Multiple string comparison -- The Holy Grail -- sequence databases and their uses- The Mother Lode -- Maps, mapping, sequencing, and superstrings -- Strings and evolutionary trees -- Three short topics -- Models of Genome-level mutations
Dimensions
26 cm
Extent
xviii, 534 pages
Isbn
9780521585194
Lccn
96046612
Media category
unmediated
Media MARC source
rdamedia
Media type code
n
Other physical details
illustrations
System control number
  • (OCoLC)35688227
  • (OCoLC)ocm35688227

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